Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRC | rs61872090 | chr10:126484555 | G/A | 3.47E-5 | 495 | 37.72 | 45.85 | 29.27 | KM Plot |
KIRC | rs62004865 | chr15:74207695 | T/A | 0 | 503 | 37.53 | 35.83 | 1.37 | KM Plot |
KIRC | rs62029317 | chr16:15848510 | G/C | 4.41E-6 | 507 | 37.37 | 37.77 | 3.67 | KM Plot |
KIRC | rs62029319 | chr16:15849830 | C/T | 4.41E-6 | 507 | 37.35 | 37.93 | 3.67 | KM Plot |
KIRC | rs62107480 | chr19:37713145 | A/T | 6.68E-5 | 501 | 40.5 | 30.6 | 20 | KM Plot |
KIRC | rs62154889 | chr2:67588570 | C/T | 2.29E-7 | 505 | 37.35 | 37.73 | 2.03 | KM Plot |
KIRC | rs62154890 | chr2:67588585 | T/G | 2.33E-7 | 502 | 37.35 | 37.75 | 2.03 | KM Plot |
KIRC | rs62154894 | chr2:67590628 | A/C | 2.29E-7 | 505 | 37.35 | 37.73 | 2.03 | KM Plot |
KIRC | rs62154896 | chr2:67593653 | A/C | 2.25E-7 | 507 | 37.35 | 37.73 | 2.03 | KM Plot |
KIRC | rs62154897 | chr2:67594695 | C/G | 2.25E-7 | 507 | 37.35 | 37.73 | 2.03 | KM Plot |
KIRC | rs62154898 | chr2:67595881 | A/G | 2.25E-7 | 507 | 37.35 | 37.73 | 2.03 | KM Plot |
KIRC | rs62154948 | chr2:67616193 | A/G | 2.01E-7 | 506 | 37.33 | 37.77 | 2.03 | KM Plot |
KIRC | rs62154949 | chr2:67617925 | A/C | 2.01E-7 | 506 | 37.33 | 37.77 | 2.03 | KM Plot |
KIRC | rs62154950 | chr2:67619008 | G/T | 2.01E-7 | 506 | 37.33 | 37.77 | 2.03 | KM Plot |
KIRC | rs62154951 | chr2:67620044 | T/C | 2.27E-7 | 504 | 37.35 | 37.75 | 2.03 | KM Plot |